Detection of the chuA gene encoding the invasive enterohemorrhagic species Escherichia coli 0157:H7 using qPCR in horse feces samples on Sumbawa Island, Indonesia

Authors : Kholik Kholik; Aswin Rafif Khairullah; Akhmad Sukri; Katty Hendriana Priscilia Riwu; Shendy Canadya Kurniawan
article cite 0 Year 2024
source: Open Veterinary Journal
Abstract

Background: 0157:H7 was identified from the feces of working horses on the island of Sumbawa. Another advance in molecular technology is genome amplification with qPCR which is the gold standard for detecting Aim: with the qPCR method sourced from horse feces. Methods: using the qPCR method. Results: bacteria. The highest to lowest Cq values and Tm from the qPCR results of the sample isolates were 15.98 (4KJ), 14.90 (19KG), 14.6 (3KJ), 13.77 (20KG), 12.56 (5KGB), and 12.20 (6KJ). Tm values are 86.7 (4KJ), 86.69 (3KJ), 86.56 (5KGB), 85.88 (20KGB), 85.81 (19KG), and 85.74 (6KJ). Conclusion: Validation, standardization of the development, and modification of qPCR technology must be carried out to harmonize testing throughout to avoid wrong interpretation of the test results so that the determination of actions to eradicate and control diseases originating from animals in the field does not occur.


Concepts :
Antibiotic Resistance in Bacteria
Salmonella and Campylobacter epidemiology
Escherichia coli research studies
article cite 0 Year 2024 source Open Veterinary Journal
SDGs
Life below water
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